Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pde6dO55057 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pde6dO55057 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pde6dO55057 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Pde6dO55057 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pde6dO55057 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pde6dO55057 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.05□□□□□ -0.64
Pde6dO55057 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.04□□□□□ -0.64
Pde6dO55057 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.04□□□□□ -0.64
Pde6dO55057 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.04□□□□□ -0.64
Pde6dO55057 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pde6dO55057 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pde6dO55057 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.03□□□□□ -0.64
Pde6dO55057 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pde6dO55057 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pde6dO55057 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.03□□□□□ -0.64
Pde6dO55057 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Gm25016-201ENSMUST00000158399 131 ntBASIC11.03□□□□□ -0.64
Pde6dO55057 Gm9682-201ENSMUST00000197505 556 ntBASIC11.03□□□□□ -0.64
Pde6dO55057 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pde6dO55057 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Pde6dO55057 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pde6dO55057 Paupar-201ENSMUST00000194826 3482 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms