Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm5538W4VSP6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm5538W4VSP6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.33□□□□□ -0.11
Gm5538W4VSP6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm5538W4VSP6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm5538W4VSP6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Gm5538W4VSP6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Gm27680-201ENSMUST00000184192 160 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Gm7775-201ENSMUST00000218871 853 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Gm18027-201ENSMUST00000218947 619 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm5538W4VSP6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Gm15653-201ENSMUST00000119247 907 ntBASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Gm27321-201ENSMUST00000185021 205 ntBASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Gm9063-201ENSMUST00000223299 582 ntBASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm5538W4VSP6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Matn2-206ENSMUST00000228570 2798 ntBASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Gm15460-201ENSMUST00000118147 391 ntBASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Gm13453-201ENSMUST00000118708 357 ntBASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Gm33320-201ENSMUST00000192232 530 ntBASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm5538W4VSP6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms