Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Matn2-206ENSMUST00000228570 2798 ntBASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ClcnkaQ9WUB7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Gm6222-201ENSMUST00000120787 396 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Gm18766-201ENSMUST00000189811 808 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Gm29541-201ENSMUST00000191351 678 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Gm5779-201ENSMUST00000218467 910 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClcnkaQ9WUB7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClcnkaQ9WUB7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClcnkaQ9WUB7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Gm5867-201ENSMUST00000063197 592 ntBASIC12.94□□□□□ -0.34
ClcnkaQ9WUB7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms