Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trem1Q9JKE2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm17808-201ENSMUST00000200859 894 ntBASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm45328-201ENSMUST00000210942 917 ntBASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm9172-201ENSMUST00000212092 954 ntBASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm18622-201ENSMUST00000219361 595 ntBASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trem1Q9JKE2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trem1Q9JKE2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem1Q9JKE2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms