Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ndc1Q8VCB1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ndc1Q8VCB1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ndc1Q8VCB1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm12859-201ENSMUST00000117834 427 ntBASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ndc1Q8VCB1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ndc1Q8VCB1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms