Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm13015-201ENSMUST00000118674 204 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm27631-201ENSMUST00000184163 466 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm38225-201ENSMUST00000194001 393 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox30Q8CGW4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox30Q8CGW4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox30Q8CGW4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.33■□□□□ 0.05
Sox30Q8CGW4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox30Q8CGW4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox30Q8CGW4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Gm18733-201ENSMUST00000173950 856 ntBASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Gm37714-201ENSMUST00000194742 342 ntBASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sox30Q8CGW4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox30Q8CGW4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms