Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lysmd4Q8CC84 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Gm9385-201ENSMUST00000117563 472 ntBASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Gm7461-201ENSMUST00000058918 827 ntBASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lysmd4Q8CC84 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lysmd4Q8CC84 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lysmd4Q8CC84 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Lysmd4Q8CC84 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Mir5131-201ENSMUST00000175426 93 ntBASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Gm27920-201ENSMUST00000183953 96 ntBASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Gm44608-201ENSMUST00000206827 855 ntBASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms