Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm13616-201ENSMUST00000120600 222 ntBASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm33320-201ENSMUST00000192232 530 ntBASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim9Q8C7M3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm46209-201ENSMUST00000217912 553 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim9Q8C7M3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Gm9229-201ENSMUST00000222777 126 ntBASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim9Q8C7M3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm15460-201ENSMUST00000118147 391 ntBASIC15.47■□□□□ 0.07
Trim9Q8C7M3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.47■□□□□ 0.07
Trim9Q8C7M3 Gm29741-201ENSMUST00000192667 421 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms