Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gm10154-201ENSMUST00000084445 354 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rft1Q8C3B8 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm16198-201ENSMUST00000118766 670 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm43575-201ENSMUST00000196420 516 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rft1Q8C3B8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rft1Q8C3B8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms