Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm44100-201ENSMUST00000204329 436 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Gm6916-202ENSMUST00000205523 195 ntBASIC11.81□□□□□ -0.52
Rif1Q6PR54 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rif1Q6PR54 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm13689-201ENSMUST00000119360 685 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm4271-201ENSMUST00000174444 973 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm45098-201ENSMUST00000207179 657 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm8894-201ENSMUST00000074642 666 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm15371-201ENSMUST00000117057 784 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rif1Q6PR54 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.8□□□□□ -0.52
Rif1Q6PR54 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm11667-201ENSMUST00000119828 486 ntBASIC11.79□□□□□ -0.52
Rif1Q6PR54 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.79□□□□□ -0.52
Rif1Q6PR54 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.79□□□□□ -0.52
Rif1Q6PR54 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rif1Q6PR54 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms