Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox17Q61473 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Gm16198-201ENSMUST00000118766 670 ntBASIC13.18□□□□□ -0.3
Sox17Q61473 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox17Q61473 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox17Q61473 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sox17Q61473 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox17Q61473 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox17Q61473 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Sox17Q61473 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox17Q61473 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.17□□□□□ -0.3
Sox17Q61473 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox17Q61473 Gm28033-201ENSMUST00000184224 96 ntBASIC13.17□□□□□ -0.3
Sox17Q61473 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox17Q61473 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox17Q61473 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.17□□□□□ -0.3
Sox17Q61473 Gm10154-201ENSMUST00000084445 354 ntBASIC13.17□□□□□ -0.3
Sox17Q61473 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.17□□□□□ -0.3
Sox17Q61473 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox17Q61473 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sox17Q61473 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox17Q61473 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox17Q61473 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 Gm27459-201ENSMUST00000184860 107 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 Ank2-226ENSMUST00000189368 339 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.16□□□□□ -0.3
Sox17Q61473 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.16□□□□□ -0.3
Sox17Q61473 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox17Q61473 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms