Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm5244-202ENSMUST00000189517 743 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem40Q4FJU9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gm43037-201ENSMUST00000196808 250 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem40Q4FJU9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem40Q4FJU9 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms