Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn1bP97952 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.85□□□□□ -0.35
Scn1bP97952 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1bP97952 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1bP97952 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Scn1bP97952 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Gm28033-201ENSMUST00000184224 96 ntBASIC12.84□□□□□ -0.35
Scn1bP97952 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.84□□□□□ -0.35
Scn1bP97952 Gm43347-201ENSMUST00000200226 580 ntBASIC12.84□□□□□ -0.35
Scn1bP97952 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.84□□□□□ -0.35
Scn1bP97952 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.84□□□□□ -0.35
Scn1bP97952 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.84□□□□□ -0.35
Scn1bP97952 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Scn1bP97952 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1bP97952 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Scn1bP97952 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Scn1bP97952 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1bP97952 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.83□□□□□ -0.36
Scn1bP97952 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn1bP97952 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Scn1bP97952 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Scn1bP97952 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Gm6296-201ENSMUST00000222599 943 ntBASIC12.83□□□□□ -0.36
Scn1bP97952 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn1bP97952 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.83□□□□□ -0.36
Scn1bP97952 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Scn1bP97952 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.83□□□□□ -0.36
Scn1bP97952 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1bP97952 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scn1bP97952 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scn1bP97952 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.82□□□□□ -0.36
Scn1bP97952 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms