Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.19■□□□□ 0.34
LIMK2P53671 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
LIMK2P53671 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.19■□□□□ 0.34
LIMK2P53671 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.19■□□□□ 0.34
LIMK2P53671 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.19■□□□□ 0.34
LIMK2P53671 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.19■□□□□ 0.34
LIMK2P53671 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.19■□□□□ 0.34
LIMK2P53671 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.19■□□□□ 0.34
LIMK2P53671 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LIMK2P53671 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 AC243591.1-201ENST00000452967 1364 ntBASIC17.18■□□□□ 0.34
LIMK2P53671 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.18■□□□□ 0.34
LIMK2P53671 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 SLC25A1P1-201ENST00000528351 927 ntBASIC17.18■□□□□ 0.34
LIMK2P53671 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 AC139887.3-201ENST00000568585 713 ntBASIC17.18■□□□□ 0.34
LIMK2P53671 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.18■□□□□ 0.34
LIMK2P53671 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.18■□□□□ 0.34
LIMK2P53671 FAM215A-202ENST00000632077 792 ntBASIC17.18■□□□□ 0.34
LIMK2P53671 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LIMK2P53671 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LIMK2P53671 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.18■□□□□ 0.34
LIMK2P53671 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.17■□□□□ 0.34
LIMK2P53671 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.17■□□□□ 0.34
LIMK2P53671 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
LIMK2P53671 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 HNRNPDP1-201ENST00000439535 754 ntBASIC17.17■□□□□ 0.34
LIMK2P53671 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.17■□□□□ 0.34
LIMK2P53671 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LIMK2P53671 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.17■□□□□ 0.34
LIMK2P53671 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.17■□□□□ 0.34
LIMK2P53671 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LIMK2P53671 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.17■□□□□ 0.34
LIMK2P53671 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.17■□□□□ 0.34
LIMK2P53671 AL049840.3-201ENST00000602669 611 ntBASIC17.17■□□□□ 0.34
LIMK2P53671 MIR7706-201ENST00000613747 67 ntBASIC17.17■□□□□ 0.34
LIMK2P53671 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.17■□□□□ 0.34
LIMK2P53671 AC073592.5-201ENST00000624854 528 ntBASIC17.17■□□□□ 0.34
LIMK2P53671 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms