Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sox2P48432 Gm9103-201ENSMUST00000119371 405 ntBASIC13.18□□□□□ -0.3
Sox2P48432 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox2P48432 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Thap2-203ENSMUST00000218989 527 ntBASIC13.18□□□□□ -0.3
Sox2P48432 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.18□□□□□ -0.3
Sox2P48432 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Sox2P48432 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox2P48432 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox2P48432 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox2P48432 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox2P48432 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox2P48432 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox2P48432 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox2P48432 Gm10275-202ENSMUST00000168697 495 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox2P48432 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox2P48432 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.17□□□□□ -0.3
Sox2P48432 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sox2P48432 Gm10275-201ENSMUST00000092620 635 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sox2P48432 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox2P48432 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.17□□□□□ -0.3
Sox2P48432 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Sox2P48432 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox2P48432 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox2P48432 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.16□□□□□ -0.3
Sox2P48432 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox2P48432 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.16□□□□□ -0.3
Sox2P48432 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.16□□□□□ -0.3
Sox2P48432 Gm15483-201ENSMUST00000120338 456 ntBASIC13.16□□□□□ -0.3
Sox2P48432 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox2P48432 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms