Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Mmp3P28862 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Mmp3P28862 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.99□□□□□ -0.01
Mmp3P28862 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm8584-201ENSMUST00000171982 758 ntBASIC14.99□□□□□ -0.01
Mmp3P28862 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.99□□□□□ -0.01
Mmp3P28862 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Mmp3P28862 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Mmp3P28862 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Mmp3P28862 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Mmp3P28862 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.98□□□□□ -0.01
Mmp3P28862 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Gm13829-201ENSMUST00000119600 138 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.98□□□□□ -0.01
Mmp3P28862 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Mmp3P28862 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm5356-201ENSMUST00000093326 615 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Mmp3P28862 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.98□□□□□ -0.01
Mmp3P28862 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Mmp3P28862 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Mmp3P28862 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Mir698-201ENSMUST00000102164 109 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm12485-201ENSMUST00000119641 291 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms