Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PdgfaP20033 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
PdgfaP20033 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PdgfaP20033 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
PdgfaP20033 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PdgfaP20033 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PdgfaP20033 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.02□□□□□ -0.17
PdgfaP20033 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.02□□□□□ -0.17
PdgfaP20033 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.02□□□□□ -0.17
PdgfaP20033 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.02□□□□□ -0.17
PdgfaP20033 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Thap2-203ENSMUST00000218989 527 ntBASIC14.02□□□□□ -0.17
PdgfaP20033 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.02□□□□□ -0.17
PdgfaP20033 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PdgfaP20033 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.02□□□□□ -0.17
PdgfaP20033 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PdgfaP20033 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.02□□□□□ -0.17
PdgfaP20033 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PdgfaP20033 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PdgfaP20033 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PdgfaP20033 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PdgfaP20033 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PdgfaP20033 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Rubie-203ENSMUST00000227803 2430 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
PdgfaP20033 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PdgfaP20033 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm18889-201ENSMUST00000174284 929 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.01□□□□□ -0.17
PdgfaP20033 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PdgfaP20033 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfaP20033 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
PdgfaP20033 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14□□□□□ -0.17
PdgfaP20033 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14□□□□□ -0.17
PdgfaP20033 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14□□□□□ -0.17
PdgfaP20033 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PdgfaP20033 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PdgfaP20033 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14□□□□□ -0.17
PdgfaP20033 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PdgfaP20033 Gm18246-201ENSMUST00000221023 728 ntBASIC14□□□□□ -0.17
PdgfaP20033 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14□□□□□ -0.17
PdgfaP20033 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfaP20033 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms