Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tp53P02340 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tp53P02340 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.2■□□□□ 0.02
Tp53P02340 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Gm15460-201ENSMUST00000118147 391 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm13453-201ENSMUST00000118708 357 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm14767-201ENSMUST00000121559 586 ntBASIC15.19■□□□□ 0.02
Tp53P02340 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.19■□□□□ 0.02
Tp53P02340 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Gm2445-201ENSMUST00000182798 989 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm27306-201ENSMUST00000183970 107 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm33320-201ENSMUST00000192232 530 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.19■□□□□ 0.02
Tp53P02340 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Gm5186-201ENSMUST00000218781 920 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm7775-201ENSMUST00000218871 853 ntBASIC15.19■□□□□ 0.02
Tp53P02340 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tp53P02340 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.19■□□□□ 0.02
Tp53P02340 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tp53P02340 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tp53P02340 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tp53P02340 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.18■□□□□ 0.02
Tp53P02340 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.18■□□□□ 0.02
Tp53P02340 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tp53P02340 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tp53P02340 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.18■□□□□ 0.02
Tp53P02340 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.18■□□□□ 0.02
Tp53P02340 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.18■□□□□ 0.02
Tp53P02340 Gm9063-201ENSMUST00000223299 582 ntBASIC15.18■□□□□ 0.02
Tp53P02340 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.18■□□□□ 0.02
Tp53P02340 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tp53P02340 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tp53P02340 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tp53P02340 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.17■□□□□ 0.02
Tp53P02340 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Tp53P02340 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.17■□□□□ 0.02
Tp53P02340 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.17■□□□□ 0.02
Tp53P02340 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Tp53P02340 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tp53P02340 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.17■□□□□ 0.02
Tp53P02340 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Tp53P02340 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tp53P02340 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tp53P02340 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tp53P02340 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tp53P02340 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tp53P02340 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tp53P02340 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms