Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cops4O88544 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.99□□□□□ -0.33
Cops4O88544 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cops4O88544 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cops4O88544 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.98□□□□□ -0.33
Cops4O88544 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Cops4O88544 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Cops4O88544 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.98□□□□□ -0.33
Cops4O88544 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.98□□□□□ -0.33
Cops4O88544 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cops4O88544 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
Cops4O88544 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cops4O88544 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.97□□□□□ -0.33
Cops4O88544 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cops4O88544 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.97□□□□□ -0.33
Cops4O88544 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.97□□□□□ -0.33
Cops4O88544 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Cops4O88544 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Cops4O88544 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Cops4O88544 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cops4O88544 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.96□□□□□ -0.33
Cops4O88544 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cops4O88544 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cops4O88544 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cops4O88544 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms