Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Proscos-202ENSMUST00000178990 666 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm27341-201ENSMUST00000183570 106 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col5a1O88207 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Col5a1O88207 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col5a1O88207 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Col5a1O88207 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.48□□□□□ -0.41
Col5a1O88207 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.48□□□□□ -0.41
Col5a1O88207 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col5a1O88207 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.47□□□□□ -0.41
Col5a1O88207 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Gm27682-201ENSMUST00000183930 110 ntBASIC12.47□□□□□ -0.41
Col5a1O88207 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.47□□□□□ -0.41
Col5a1O88207 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.47□□□□□ -0.41
Col5a1O88207 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col5a1O88207 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col5a1O88207 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col5a1O88207 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.46□□□□□ -0.41
Col5a1O88207 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.46□□□□□ -0.41
Col5a1O88207 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col5a1O88207 Gm29396-201ENSMUST00000185659 716 ntBASIC12.46□□□□□ -0.41
Col5a1O88207 Gm37008-201ENSMUST00000195712 319 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms