Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rnf13O54965 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm9385-201ENSMUST00000117563 472 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.74□□□□□ -0.37
Rnf13O54965 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf13O54965 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.74□□□□□ -0.37
Rnf13O54965 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Rnf13O54965 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.73□□□□□ -0.37
Rnf13O54965 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.73□□□□□ -0.37
Rnf13O54965 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf13O54965 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf13O54965 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.73□□□□□ -0.37
Rnf13O54965 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf13O54965 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Rnf13O54965 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf13O54965 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.73□□□□□ -0.37
Rnf13O54965 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf13O54965 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.73□□□□□ -0.37
Rnf13O54965 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf13O54965 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rnf13O54965 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf13O54965 Grk6-205ENSMUST00000224653 2976 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rnf13O54965 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.72□□□□□ -0.37
Rnf13O54965 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Rnf13O54965 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf13O54965 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf13O54965 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms