Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Gm29667-201ENSMUST00000190817 490 ntBASIC16.41■□□□□ 0.22
Usp42B2RQC2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Usp42B2RQC2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.4■□□□□ 0.22
Usp42B2RQC2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.4■□□□□ 0.22
Usp42B2RQC2 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.4■□□□□ 0.22
Usp42B2RQC2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.4■□□□□ 0.22
Usp42B2RQC2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Usp42B2RQC2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Usp42B2RQC2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm13385-201ENSMUST00000121089 220 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm8927-201ENSMUST00000181978 981 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm9522-201ENSMUST00000182394 926 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm3222-201ENSMUST00000071282 990 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.39■□□□□ 0.21
Usp42B2RQC2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Usp42B2RQC2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Gm15240-201ENSMUST00000118156 720 ntBASIC16.38■□□□□ 0.21
Usp42B2RQC2 Gm15321-201ENSMUST00000121290 288 ntBASIC16.38■□□□□ 0.21
Usp42B2RQC2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.38■□□□□ 0.21
Usp42B2RQC2 Gm21854-201ENSMUST00000179901 471 ntBASIC16.38■□□□□ 0.21
Usp42B2RQC2 Gm24694-201ENSMUST00000180054 110 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms