Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3a3Q9D554 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Gm25016-201ENSMUST00000158399 131 ntBASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sf3a3Q9D554 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Gm10231-201ENSMUST00000181584 441 ntBASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Gm10175-202ENSMUST00000208752 441 ntBASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3a3Q9D554 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3a3Q9D554 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms