Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ska1Q9CPV1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm16198-201ENSMUST00000118766 670 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm5177-201ENSMUST00000183092 997 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm27301-201ENSMUST00000184012 127 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm9182-201ENSMUST00000217829 639 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ska1Q9CPV1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ska1Q9CPV1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ska1Q9CPV1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ska1Q9CPV1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ska1Q9CPV1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ska1Q9CPV1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ska1Q9CPV1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms