Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm38225-201ENSMUST00000194001 393 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1b1Q99LU0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp1b1Q99LU0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.33□□□□□ -0.27
Chmp1b1Q99LU0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Gm23547-201ENSMUST00000158210 271 ntBASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1b1Q99LU0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Gm37230-201ENSMUST00000194491 818 ntBASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1b1Q99LU0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chmp1b1Q99LU0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms