Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm1Q8VC85 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.5□□□□□ -0.25
Lsm1Q8VC85 BC001981-202ENSMUST00000191393 1545 ntBASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm1Q8VC85 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Rprl2-201ENSMUST00000157150 290 ntBASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm1Q8VC85 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm1Q8VC85 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms