Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.95□□□□□ -0.18
Lrif1Q8CDD9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm14822-201ENSMUST00000122247 291 ntBASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lrif1Q8CDD9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lrif1Q8CDD9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lrif1Q8CDD9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms