Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Eri3Q8C460 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.4□□□□□ -0.26
Eri3Q8C460 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Eri3Q8C460 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Eri3Q8C460 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Eri3Q8C460 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Eri3Q8C460 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.39□□□□□ -0.27
Eri3Q8C460 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.39□□□□□ -0.27
Eri3Q8C460 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Eri3Q8C460 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Eri3Q8C460 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Gm15653-201ENSMUST00000119247 907 ntBASIC13.38□□□□□ -0.27
Eri3Q8C460 Gm12428-201ENSMUST00000119844 727 ntBASIC13.38□□□□□ -0.27
Eri3Q8C460 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Gm6916-202ENSMUST00000205523 195 ntBASIC13.38□□□□□ -0.27
Eri3Q8C460 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Eri3Q8C460 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Eri3Q8C460 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Eri3Q8C460 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms