Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.1■□□□□ 0.01
Nop53Q8BK35 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Acot6-202ENSMUST00000222921 3622 ntBASIC15.1■□□□□ 0.01
Nop53Q8BK35 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nop53Q8BK35 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Gm10275-202ENSMUST00000168697 495 ntBASIC15.09■□□□□ 0.01
Nop53Q8BK35 Gm45612-201ENSMUST00000211320 160 ntBASIC15.09■□□□□ 0.01
Nop53Q8BK35 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.09■□□□□ 0.01
Nop53Q8BK35 Gm10275-201ENSMUST00000092620 635 ntBASIC15.09■□□□□ 0.01
Nop53Q8BK35 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.09■□□□□ 0.01
Nop53Q8BK35 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.09■□□□□ 0.01
Nop53Q8BK35 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nop53Q8BK35 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nop53Q8BK35 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.08■□□□□ 0.01
Nop53Q8BK35 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nop53Q8BK35 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nop53Q8BK35 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Nop53Q8BK35 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Gm15427-201ENSMUST00000117288 531 ntBASIC15.08■□□□□ 0
Nop53Q8BK35 Gm11543-201ENSMUST00000120758 370 ntBASIC15.08■□□□□ 0
Nop53Q8BK35 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.08■□□□□ 0
Nop53Q8BK35 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.08■□□□□ 0
Nop53Q8BK35 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.08■□□□□ 0
Nop53Q8BK35 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nop53Q8BK35 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.08■□□□□ 0
Nop53Q8BK35 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nop53Q8BK35 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nop53Q8BK35 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nop53Q8BK35 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.08■□□□□ 0
Nop53Q8BK35 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Nop53Q8BK35 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.07■□□□□ 0
Nop53Q8BK35 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.07■□□□□ 0
Nop53Q8BK35 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Nop53Q8BK35 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.07■□□□□ 0
Nop53Q8BK35 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.07■□□□□ 0
Nop53Q8BK35 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nop53Q8BK35 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.07■□□□□ 0
Nop53Q8BK35 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nop53Q8BK35 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms