Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd3Q6P9Z1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Gm27920-201ENSMUST00000183953 96 ntBASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Gm43514-201ENSMUST00000198852 424 ntBASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd3Q6P9Z1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd3Q6P9Z1 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gm1401-201ENSMUST00000122048 772 ntBASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcd3Q6P9Z1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms