Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Notch3Q61982 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Notch3Q61982 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Notch3Q61982 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Notch3Q61982 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Notch3Q61982 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Gm8602-201ENSMUST00000184045 607 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.85□□□□□ -0.67
Notch3Q61982 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Notch3Q61982 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Celf4-206ENSMUST00000224553 1729 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Notch3Q61982 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.85□□□□□ -0.67
Notch3Q61982 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.85□□□□□ -0.67
Notch3Q61982 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Gm27631-201ENSMUST00000184163 466 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Notch3Q61982 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.85□□□□□ -0.67
Notch3Q61982 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Notch3Q61982 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.84□□□□□ -0.67
Notch3Q61982 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.84□□□□□ -0.67
Notch3Q61982 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Notch3Q61982 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.84□□□□□ -0.67
Notch3Q61982 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.84□□□□□ -0.67
Notch3Q61982 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.84□□□□□ -0.67
Notch3Q61982 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.84□□□□□ -0.67
Notch3Q61982 Gm15824-201ENSMUST00000119516 955 ntBASIC10.84□□□□□ -0.67
Notch3Q61982 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.84□□□□□ -0.67
Notch3Q61982 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Notch3Q61982 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms