Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1brtQ3UNC9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm715-201ENSMUST00000117865 831 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm12441-201ENSMUST00000121806 588 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm27389-201ENSMUST00000183622 195 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm9172-201ENSMUST00000212092 954 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
Cks1brtQ3UNC9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.08□□□□□ -0.8
Cks1brtQ3UNC9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms