Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trim63Q38HM4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim63Q38HM4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.58□□□□□ -0.55
Trim63Q38HM4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim63Q38HM4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim63Q38HM4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.58□□□□□ -0.56
Trim63Q38HM4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.58□□□□□ -0.56
Trim63Q38HM4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.58□□□□□ -0.56
Trim63Q38HM4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.58□□□□□ -0.56
Trim63Q38HM4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim63Q38HM4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.57□□□□□ -0.56
Trim63Q38HM4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim63Q38HM4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.56□□□□□ -0.56
Trim63Q38HM4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm11249-201ENSMUST00000117071 859 ntBASIC11.56□□□□□ -0.56
Trim63Q38HM4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm18284-201ENSMUST00000172604 624 ntBASIC11.56□□□□□ -0.56
Trim63Q38HM4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm42569-201ENSMUST00000200539 472 ntBASIC11.56□□□□□ -0.56
Trim63Q38HM4 Gm43183-201ENSMUST00000200632 547 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms