Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mmp13P33435 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp13P33435 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp13P33435 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp13P33435 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp13P33435 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.42□□□□□ -0.1
Mmp13P33435 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.42□□□□□ -0.1
Mmp13P33435 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.42□□□□□ -0.1
Mmp13P33435 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.42□□□□□ -0.1
Mmp13P33435 Gm5479-201ENSMUST00000160578 435 ntBASIC14.42□□□□□ -0.1
Mmp13P33435 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp13P33435 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mmp13P33435 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.42□□□□□ -0.1
Mmp13P33435 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp13P33435 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.41□□□□□ -0.1
Mmp13P33435 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.41□□□□□ -0.1
Mmp13P33435 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.41□□□□□ -0.1
Mmp13P33435 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.41□□□□□ -0.1
Mmp13P33435 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Gm8396-201ENSMUST00000057361 823 ntBASIC14.41□□□□□ -0.1
Mmp13P33435 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mmp13P33435 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mmp13P33435 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp13P33435 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Mmp13P33435 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.4□□□□□ -0.1
Mmp13P33435 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.4□□□□□ -0.1
Mmp13P33435 Gm15483-201ENSMUST00000120338 456 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Gm18737-201ENSMUST00000173594 937 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.4□□□□□ -0.1
Mmp13P33435 Gm43474-201ENSMUST00000196415 774 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Gm5312-201ENSMUST00000203728 547 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.4□□□□□ -0.1
Mmp13P33435 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp13P33435 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.4□□□□□ -0.1
Mmp13P33435 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.39□□□□□ -0.11
Mmp13P33435 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.39□□□□□ -0.11
Mmp13P33435 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms