Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Irf8P23611 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Irf8P23611 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.18■□□□□ 0.02
Irf8P23611 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.18■□□□□ 0.02
Irf8P23611 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Irf8P23611 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Irf8P23611 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Irf8P23611 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Irf8P23611 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Irf8P23611 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.17■□□□□ 0.02
Irf8P23611 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Irf8P23611 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.17■□□□□ 0.02
Irf8P23611 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Irf8P23611 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Irf8P23611 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Irf8P23611 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.16■□□□□ 0.02
Irf8P23611 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.16■□□□□ 0.02
Irf8P23611 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.16■□□□□ 0.02
Irf8P23611 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.16■□□□□ 0.02
Irf8P23611 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.16■□□□□ 0.02
Irf8P23611 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.16■□□□□ 0.02
Irf8P23611 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Irf8P23611 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Irf8P23611 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.16■□□□□ 0.02
Irf8P23611 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Irf8P23611 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Irf8P23611 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Irf8P23611 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Irf8P23611 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.15■□□□□ 0.02
Irf8P23611 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Irf8P23611 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Gm27838-201ENSMUST00000184829 128 ntBASIC15.15■□□□□ 0.02
Irf8P23611 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.15■□□□□ 0.02
Irf8P23611 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Mir497b-201ENSMUST00000093601 125 ntBASIC15.15■□□□□ 0.02
Irf8P23611 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Irf8P23611 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Irf8P23611 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Irf8P23611 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Irf8P23611 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms