Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxd8P23463 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd8P23463 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm29649-201ENSMUST00000185649 419 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm38671-201ENSMUST00000200573 130 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm42550-201ENSMUST00000201553 960 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm17330-201ENSMUST00000221047 165 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd8P23463 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.44□□□□□ -0.1
Hoxd8P23463 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd8P23463 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.43□□□□□ -0.1
Hoxd8P23463 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd8P23463 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd8P23463 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd8P23463 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hoxd8P23463 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.42□□□□□ -0.1
Hoxd8P23463 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd8P23463 Gm8598-201ENSMUST00000221184 836 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms