Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarce1O54941 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarce1O54941 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Smarce1O54941 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarce1O54941 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarce1O54941 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Smarce1O54941 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Smarce1O54941 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm2810-201ENSMUST00000118681 990 ntBASIC16.72■□□□□ 0.27
Smarce1O54941 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.72■□□□□ 0.27
Smarce1O54941 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.72■□□□□ 0.27
Smarce1O54941 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm20553-201ENSMUST00000204205 844 ntBASIC16.72■□□□□ 0.27
Smarce1O54941 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarce1O54941 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.72■□□□□ 0.27
Smarce1O54941 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarce1O54941 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.72■□□□□ 0.27
Smarce1O54941 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarce1O54941 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarce1O54941 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Smarce1O54941 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarce1O54941 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarce1O54941 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarce1O54941 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.71■□□□□ 0.27
Smarce1O54941 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.71■□□□□ 0.27
Smarce1O54941 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smarce1O54941 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarce1O54941 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm12260-201ENSMUST00000122447 411 ntBASIC16.7■□□□□ 0.26
Smarce1O54941 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm18057-201ENSMUST00000208220 503 ntBASIC16.7■□□□□ 0.26
Smarce1O54941 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarce1O54941 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.7■□□□□ 0.26
Smarce1O54941 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarce1O54941 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.7■□□□□ 0.26
Smarce1O54941 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.7■□□□□ 0.26
Smarce1O54941 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smarce1O54941 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarce1O54941 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms