Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc194A0A140LIT1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Gm2810-201ENSMUST00000118681 990 ntBASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Gm38225-201ENSMUST00000194001 393 ntBASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc194A0A140LIT1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc194A0A140LIT1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Gm45612-201ENSMUST00000211320 160 ntBASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc194A0A140LIT1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms