Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Gm5364-201ENSMUST00000216789 889 ntBASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Gm9182-201ENSMUST00000217829 639 ntBASIC15.34■□□□□ 0.05
Ssr1Q9CY50 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ssr1Q9CY50 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ssr1Q9CY50 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm12260-201ENSMUST00000122447 411 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm17968-201ENSMUST00000194902 784 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm45098-201ENSMUST00000207179 657 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm45747-201ENSMUST00000212203 999 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ssr1Q9CY50 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gm14042-201ENSMUST00000120139 833 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gm15483-201ENSMUST00000120338 456 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ssr1Q9CY50 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ssr1Q9CY50 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms