Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga6Q91XY2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Gm27631-201ENSMUST00000184163 466 ntBASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhga6Q91XY2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm12957-201ENSMUST00000117835 377 ntBASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhga6Q91XY2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 Gm45453-201ENSMUST00000211758 853 ntBASIC14.05□□□□□ -0.16
Pcdhga6Q91XY2 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms