Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps39Q8R5L3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps39Q8R5L3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Gm27494-201ENSMUST00000184735 189 ntBASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps39Q8R5L3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Gm11745-201ENSMUST00000121669 448 ntBASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps39Q8R5L3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms