Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh20Q8BIZ0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh20Q8BIZ0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm25287-201ENSMUST00000103846 110 ntBASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm22918-201ENSMUST00000103855 110 ntBASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh20Q8BIZ0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh20Q8BIZ0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh20Q8BIZ0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.77□□□□□ -0.2
Pcdh20Q8BIZ0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Pcdh20Q8BIZ0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh20Q8BIZ0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh20Q8BIZ0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh20Q8BIZ0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms