Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm27301-201ENSMUST00000184012 127 ntBASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.93□□□□□ -0.5
Upk3bQ80YF6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk3bQ80YF6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Gm21362-201ENSMUST00000194272 928 ntBASIC11.92□□□□□ -0.5
Upk3bQ80YF6 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk3bQ80YF6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Acot6-202ENSMUST00000222921 3622 ntBASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Gm5177-201ENSMUST00000183092 997 ntBASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Upk3bQ80YF6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk3bQ80YF6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms