Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.49□□□□□ -0.57
Vma21Q78T54 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.49□□□□□ -0.57
Vma21Q78T54 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vma21Q78T54 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vma21Q78T54 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.49□□□□□ -0.57
Vma21Q78T54 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm9385-201ENSMUST00000117563 472 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm15483-201ENSMUST00000120338 456 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm18733-201ENSMUST00000173950 856 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm27920-201ENSMUST00000183953 96 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.48□□□□□ -0.57
Vma21Q78T54 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.48□□□□□ -0.57
Vma21Q78T54 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.48□□□□□ -0.57
Vma21Q78T54 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vma21Q78T54 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Gm11543-201ENSMUST00000120758 370 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms