Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col5a2Q3U962 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.5■□□□□ 0.23
Col5a2Q3U962 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.5■□□□□ 0.23
Col5a2Q3U962 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Gm17376-201ENSMUST00000166016 84 ntBASIC16.5■□□□□ 0.23
Col5a2Q3U962 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.5■□□□□ 0.23
Col5a2Q3U962 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col5a2Q3U962 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.49■□□□□ 0.23
Col5a2Q3U962 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col5a2Q3U962 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm2991-201ENSMUST00000173338 480 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm16379-201ENSMUST00000161469 348 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm6222-202ENSMUST00000182143 629 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm8762-201ENSMUST00000193486 339 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.48■□□□□ 0.23
Col5a2Q3U962 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col5a2Q3U962 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms