Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Gm15427-201ENSMUST00000117288 531 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Gm18733-201ENSMUST00000173950 856 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.03■□□□□ -0
Nhej1Q3KNJ2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nhej1Q3KNJ2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.02■□□□□ -0
Nhej1Q3KNJ2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nhej1Q3KNJ2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm9727-201ENSMUST00000161387 555 ntBASIC15.01□□□□□ -0.01
Nhej1Q3KNJ2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms