Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim43cP86449 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim43cP86449 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.35■□□□□ 0.05
Trim43cP86449 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trim43cP86449 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim43cP86449 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trim43cP86449 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 AA543401-201ENSMUST00000164248 1269 ntBASIC15.34■□□□□ 0.05
Trim43cP86449 Gm27430-201ENSMUST00000184585 107 ntBASIC15.34■□□□□ 0.05
Trim43cP86449 Gm44333-201ENSMUST00000197168 107 ntBASIC15.34■□□□□ 0.05
Trim43cP86449 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim43cP86449 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.34■□□□□ 0.05
Trim43cP86449 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim43cP86449 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim43cP86449 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43cP86449 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43cP86449 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43cP86449 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim43cP86449 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trim43cP86449 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim43cP86449 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Gm6888-201ENSMUST00000221983 706 ntBASIC15.33■□□□□ 0.04
Trim43cP86449 Gm9063-201ENSMUST00000223299 582 ntBASIC15.33■□□□□ 0.04
Trim43cP86449 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim43cP86449 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim43cP86449 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trim43cP86449 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim43cP86449 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43cP86449 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim43cP86449 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim43cP86449 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim43cP86449 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim43cP86449 Rubie-203ENSMUST00000227803 2430 ntBASIC15.32■□□□□ 0.04
Trim43cP86449 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Gm8410-201ENSMUST00000117225 605 ntBASIC15.32■□□□□ 0.04
Trim43cP86449 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.32■□□□□ 0.04
Trim43cP86449 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim43cP86449 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43cP86449 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.31■□□□□ 0.04
Trim43cP86449 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim43cP86449 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43cP86449 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.31■□□□□ 0.04
Trim43cP86449 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43cP86449 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.31■□□□□ 0.04
Trim43cP86449 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43cP86449 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43cP86449 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim43cP86449 Gm37714-201ENSMUST00000194742 342 ntBASIC15.31■□□□□ 0.04
Trim43cP86449 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms