Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.92■□□□□ 0.62
Nphp4P59240 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nphp4P59240 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Nphp4P59240 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.92■□□□□ 0.62
Nphp4P59240 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.92■□□□□ 0.62
Nphp4P59240 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.91■□□□□ 0.62
Nphp4P59240 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.91■□□□□ 0.62
Nphp4P59240 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nphp4P59240 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.91■□□□□ 0.62
Nphp4P59240 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Gm24644-201ENSMUST00000157114 139 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.91■□□□□ 0.62
Nphp4P59240 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Gm45784-201ENSMUST00000188360 142 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.91■□□□□ 0.62
Nphp4P59240 Gm38671-201ENSMUST00000200573 130 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 Gm42550-201ENSMUST00000201553 960 ntBASIC18.91■□□□□ 0.62
Nphp4P59240 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nphp4P59240 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nphp4P59240 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nphp4P59240 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.9■□□□□ 0.62
Nphp4P59240 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.9■□□□□ 0.62
Nphp4P59240 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Nphp4P59240 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nphp4P59240 Gm10156-201ENSMUST00000122364 462 ntBASIC18.9■□□□□ 0.62
Nphp4P59240 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.9■□□□□ 0.62
Nphp4P59240 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nphp4P59240 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.9■□□□□ 0.62
Nphp4P59240 Gm9899-201ENSMUST00000065519 555 ntBASIC18.9■□□□□ 0.62
Nphp4P59240 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.9■□□□□ 0.62
Nphp4P59240 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nphp4P59240 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC18.89■□□□□ 0.62
Nphp4P59240 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.89■□□□□ 0.62
Nphp4P59240 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Nphp4P59240 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Nphp4P59240 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nphp4P59240 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nphp4P59240 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms