Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk2P38575 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Upk2P38575 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Upk2P38575 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.39□□□□□ -0.43
Upk2P38575 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk2P38575 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.39□□□□□ -0.43
Upk2P38575 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.39□□□□□ -0.43
Upk2P38575 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Upk2P38575 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.38□□□□□ -0.43
Upk2P38575 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Upk2P38575 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.38□□□□□ -0.43
Upk2P38575 Gm15693-201ENSMUST00000120470 637 ntBASIC12.38□□□□□ -0.43
Upk2P38575 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.38□□□□□ -0.43
Upk2P38575 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.38□□□□□ -0.43
Upk2P38575 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Gm8396-201ENSMUST00000057361 823 ntBASIC12.38□□□□□ -0.43
Upk2P38575 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Upk2P38575 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Upk2P38575 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.37□□□□□ -0.43
Upk2P38575 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Gm16476-201ENSMUST00000221544 139 ntBASIC12.37□□□□□ -0.43
Upk2P38575 Dupd1-202ENSMUST00000224735 548 ntBASIC12.37□□□□□ -0.43
Upk2P38575 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.37□□□□□ -0.43
Upk2P38575 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Upk2P38575 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Upk2P38575 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Upk2P38575 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.36□□□□□ -0.43
Upk2P38575 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Upk2P38575 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Upk2P38575 Gm23935-201ENSMUST00000102303 57 ntBASIC12.36□□□□□ -0.43
Upk2P38575 Gm24270-201ENSMUST00000102326 57 ntBASIC12.36□□□□□ -0.43
Upk2P38575 Gm24543-201ENSMUST00000103867 82 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms