Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.04□□□□□ -0.32
Cd40lgP27548 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.04□□□□□ -0.32
Cd40lgP27548 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.04□□□□□ -0.32
Cd40lgP27548 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cd40lgP27548 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cd40lgP27548 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.03□□□□□ -0.32
Cd40lgP27548 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Gm10576-201ENSMUST00000191927 825 ntBASIC13.03□□□□□ -0.32
Cd40lgP27548 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cd40lgP27548 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cd40lgP27548 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cd40lgP27548 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cd40lgP27548 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40lgP27548 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.02□□□□□ -0.33
Cd40lgP27548 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd40lgP27548 Gm6415-201ENSMUST00000118488 348 ntBASIC13.02□□□□□ -0.33
Cd40lgP27548 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.02□□□□□ -0.33
Cd40lgP27548 Olfr286-202ENSMUST00000205305 969 ntBASIC13.02□□□□□ -0.33
Cd40lgP27548 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.02□□□□□ -0.33
Cd40lgP27548 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms